PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01760.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 591aa    MW: 67409.3 Da    PI: 8.5317
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01760.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.71.9e-29153238187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW++qe+laL+e+r++++++++++++k+plW+e+++ m +e+g++rs k+C+ek+enl k+ykk+keg++++  ++ +++++f+qlea
  Migut.L01760.1.p 153 RWPRQETLALLEIRSNLDSKFKEANQKGPLWDEIARIMcEEHGYQRSGKKCREKFENLYKYYKKTKEGKSGK--RQGKHYRFFRQLEA 238
                       8***********************************998*******************************96..55567*******85 PP

2trihelix47.54.6e-15444521273
          trihelix   2 WtkqevlaLiearremeerlrr.....gklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrts 73 
                       W+++e+  Li++r+eme+r+++     +++++ lWee+++km   g  ++s+ +C+ekw+++n +  k+++ + +r++
  Migut.L01760.1.p 444 WPESEITRLIQLRNEMESRFQQcringSNSDGMLWEEIAAKMGCFGNeQKSASMCREKWDSVNDYLIKCNKKKLRREN 521
                       *********************75565568*************99999567***************9888776554422 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.31150213IPR001005SANT/Myb domain
PfamPF138373.5E-20153239No hitNo description
PROSITE profilePS500907.027153211IPR017877Myb-like domain
CDDcd122032.44E-22153218No hitNo description
SMARTSM007170.91440508IPR001005SANT/Myb domain
PfamPF138375.9E-10444535No hitNo description
CDDcd122034.26E-15444508No hitNo description
PROSITE profilePS500906.539444506IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    Send to blast
MIRVYRSPIH RYLLLFSLSK FSLIQLNLIK TFTVCVFDRF DSISLSLIIY NMEDQYGMAD  60
LRQYITGGRP YFPAVSRQPD FLQSSHHHHR GLISPHPYDM LMFGSDHPNI VLNASAGGGE  120
PSSAAAARGL SVSFEMDAAG GAIGGGDGGC TARWPRQETL ALLEIRSNLD SKFKEANQKG  180
PLWDEIARIM CEEHGYQRSG KKCREKFENL YKYYKKTKEG KSGKRQGKHY RFFRQLEALY  240
GDQTASNNNN YNNNNNNNNN NNYSASVISG TNYDRCNYPL ANNSNYQEAS CLVPKLSAET  300
SHVSFSNCSS DSNTSSSDDE SDTNNPRKNK KMKKRGGKRD LKAKIKESIE AQMKKLMEKQ  360
EAWMEKMMNT IEHKDQERIM REEQWRKQDS DRIEREHKFW AGERAWMEAR DAALMDAFNK  420
FTRKEFTRAD NSPSGNYNSN NIIWPESEIT RLIQLRNEME SRFQQCRING SNSDGMLWEE  480
IAAKMGCFGN EQKSASMCRE KWDSVNDYLI KCNKKKLRRE NINTTTKGGS SCMYYHDDTD  540
NQSIVCNQGL GGLLAYSSCD AISTEPQLSN STAVNDTCLR YFFGDGYGRS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836100.10.0PREDICTED: trihelix transcription factor PTL-like
TrEMBLA0A022REI10.0A0A022REI1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30632451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.17e-49Trihelix family protein